MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Micrococcus yunnanensis
19428wG4_IOV6
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 248
bases: 2,477,181 bps
CDS: 2,232
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 49
misc RNA:
Total features: 2,285
Total number of protein coding genes annotated/found:
2,232
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5018|JADGKS010000009.1
SEQF5018_02285
Genome Viewer
NA
AA
345/115
42598-42254
Regulatory protein RecX
SEQF5018|JADGKS010000009.1
SEQF5018_02284
Genome Viewer
NA
AA
1548/516
42214-40667
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
SEQF5018|JADGKS010000009.1
SEQF5018_02283
Genome Viewer
NA
AA
939/313
40667-39729
tRNA dimethylallyltransferase
SEQF5018|JADGKS010000009.1
SEQF5018_02282
Genome Viewer
NA
AA
954/318
39719-38766
Diaminopimelate epimerase
SEQF5018|JADGKS010000009.1
SEQF5018_02281
Genome Viewer
NA
AA
636/212
38073-38708
Ribosomal RNA small subunit methyltransferase C
SEQF5018|JADGKS010000009.1
SEQF5018_02280
Genome Viewer
NA
AA
1251/417
36797-38047
hypothetical protein
SEQF5018|JADGKS010000009.1
SEQF5018_02279
Genome Viewer
NA
AA
180/60
36687-36508
hypothetical protein
SEQF5018|JADGKS010000009.1
SEQF5018_02278
Genome Viewer
NA
AA
1638/546
36441-34804
GTPase HflX
SEQF5018|JADGKS010000009.1
SEQF5018_02277
Genome Viewer
NA
AA
2100/700
34807-32708
putative ATP-dependent helicase DinG
SEQF5018|JADGKS010000009.1
SEQF5018_02276
Genome Viewer
NA
AA
717/239
31948-32664
LexA repressor
SEQF5018|JADGKS010000009.1
SEQF5018_02275
Genome Viewer
NA
AA
375/125
31656-31282
hypothetical protein
SEQF5018|JADGKS010000009.1
SEQF5018_02274
Genome Viewer
NA
AA
1122/374
31238-30117
Histidinol-phosphate aminotransferase
SEQF5018|JADGKS010000009.1
SEQF5018_02273
Genome Viewer
NA
AA
618/206
29971-29354
Imidazoleglycerol-phosphate dehydratase
SEQF5018|JADGKS010000009.1
SEQF5018_02272
Genome Viewer
NA
AA
660/220
29354-28695
Imidazole glycerol phosphate synthase subunit HisH
SEQF5018|JADGKS010000009.1
SEQF5018_02271
Genome Viewer
NA
AA
159/53
28695-28537
hypothetical protein
SEQF5018|JADGKS010000009.1
SEQF5018_02270
Genome Viewer
NA
AA
786/262
28504-27719
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
SEQF5018|JADGKS010000009.1
SEQF5018_02269
Genome Viewer
NA
AA
1002/334
27722-26721
hypothetical protein
SEQF5018|JADGKS010000009.1
SEQF5018_02268
Genome Viewer
NA
AA
1245/415
26598-25354
hypothetical protein
SEQF5018|JADGKS010000009.1
SEQF5018_02267
Genome Viewer
NA
AA
546/182
24709-25254
hypothetical protein
SEQF5018|JADGKS010000009.1
SEQF5018_02266
Genome Viewer
NA
AA
690/230
24048-24737
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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